This happens with every teacher. Ultimately the outer group becomes more and more influential; it becomes an establishment. The first thing an establishment has to do is to kill its own esoteric part, because the esoteric group is always a disturbance. Because of "heresy," Christianity has been destroying all that is esoteric.
And now the pope is at the opposite extreme to Jesus: this is the ultimate schism between the exoteric and the esoteric. The pope is more like the priests who crucified Jesus than like Jesus himself. If Jesus comes again, he will be crucified in Rome this time—by the Vatican. The Vatican is the exoteric, organizational part, the establishment.
These are intrinsic problems—they happen, and you cannot do anything about it.